Information Criteria for quantifying loss of reversibility in parallelized KMC

نویسندگان

  • Konstantinos Gourgoulias
  • Markos A. Katsoulakis
  • Luc Rey-Bellet
چکیده

Parallel Kinetic Monte Carlo (KMC) is a potent tool to simulate stochastic particle systems efficiently. However, despite literature on quantifying domain decomposition errors of the particle system for this class of algorithms in the short and in the long time regime, no study yet explores and quantifies the loss of time-reversibility in Parallel KMC. Inspired by concepts from non-equilibrium statistical mechanics, we propose the entropy production per unit time, or entropy production rate, given in terms of an observable and a corresponding estimator, as a metric that quantifies the loss of reversibility. Typically, this is a quantity that cannot be computed explicitly for Parallel KMC, which is why we develop a posteriori estimators that have good scaling properties with respect to the size of the system. Through these estimators, we can connect the different parameters of the scheme, such as the communication time step of the parallelization, the choice of the domain decomposition, and the computational schedule, with its performance in controlling the loss of reversibility. From this point of view, the entropy production rate can be seen both as an information criterion to compare the reversibility of different parallel schemes and as a tool to diagnose reversibility issues with a particular scheme. As demonstration, we use Sandia Lab’s SPPARKS software to compare different parallelization schemes and different domain (lattice) decompositions.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Relationship between KMC and neonatal outcomes

Introduction: One of the best and most effective ways to care and prevent adverse effects in premature infants is to actively engage mothers in caring for an infant. The present study aims at investigating the relationship between Kangaroo Mother Care (KMC) and neonatal outcomes. Method: This descriptive study was 600 infants and mothers. This study used the convenience sampling method. All mo...

متن کامل

Comparison of kangaroo mother care with traditional care (Incubator) of premature infants in order to accelerate discharge criteria

Kangaroo mother care (KMC) is effective care method that avoids aggressive routinely methods in neonatal wards. Objective of this study was comparing KMC with conventional care (incubator) of premature Infant in neonatal ward. This study was a randomized controlled clinical trial that has been done in 17 months. 40 premature neonates whose birth weight was less than 1500gr were enrolled in the ...

متن کامل

Readiness of hospitals to provide Kangaroo Mother Care (KMC) and documentation of KMC service delivery: Analysis of Malawi 2014 Emergency Obstetric and Newborn Care (EmONC) survey data

BACKGROUND Malawi introduced Kangaroo Mother Care (KMC) in 1999 as part of its efforts to address newborn morbidity and mortality and has continued to expand KMC services across the country. Yet, data on availability of KMC services and routine service provision are limited. METHODS Data from the 2014 Emergency Obstetric Newborn Care (EmONC) survey, which was a census of all 87 hospitals in M...

متن کامل

Kangaroo mother care for clinically unstable neonates weighing ≤2000 g: Is it feasible at a hospital in Uganda?

Background Kangaroo mother care (KMC) for stable neonates ≤2000 g (g) is associated with decreased mortality, sepsis, hypothermia, and length of stay compared to conventional care. The World Health Organization states that KMC "should be initiated… as soon as newborns are clinically stable" [12]. However, the majority of deaths occur in unstable neonates. We aimed to determine the proportion of...

متن کامل

What is kangaroo mother care? Systematic review of the literature

BACKGROUND Kangaroo mother care (KMC), often defined as skin-to-skin contact between a mother and her newborn, frequent or exclusive breastfeeding, and early discharge from the hospital has been effective in reducing the risk of mortality among preterm and low birth weight infants. Research studies and program implementation of KMC have used various definitions. OBJECTIVES To describe the cur...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:
  • J. Comput. Physics

دوره 328  شماره 

صفحات  -

تاریخ انتشار 2017